topic 3. How to evaluate output?

Specificity, sensitivity, recall, F-score

Receiver operating characteristic curve, AUC

Statistical significance : p -value, False Discovery Rate (FDR)

• Supporting Materials

  1. PSDR: Chapter 5

  2. ROCR package - Visualizing classifier performance in R

  3. Benjamini,Y. and Hochberg,Y. (1995) Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. J Royal Statistical Soc Ser B Methodol, 57, 289–300.

topic03_measurement.pptx

code03.measure.zip

note03_Rsquare-correlation.pdf